Reading List

R. Erban, S. J. Chapman and P. K. Maini, A practical guide to stochastic simulation of reaction-diffusion processes (2007) Available at http://arxiv.org/abs/0704.1908

Students are by no means expected to read all these sources. There are suggestions intended to be helpful to students interested exploring the subjects covered in further detail.

1. H. Berg, Random Walks in Biology (Princeton University Press, 1993).
2. D. T. Gillespie, Markov Processes, an Introduction for Physical Scientists (Gulf Professional Publishing, 1992).
3. P. Attard, Non-Equilibrium Thermodynamics and Statistical Mechanics, (Oxford University Press, 2012).
4. A. Nitzan, Chemical Dynamics in Condensed Phases, (Oxford University Press, 2006).
5. P. Krapivsky, S. Redner and E. Ben-Naim, A Kinetic View of Statistical Physics, (Cambridge University Press, 2010).
6. D. Anderson, T. Kurtz, Stochastic Analysis of Biochemical Systems, (Springer, 2015).
7. B. Leimkuhler, C. Matthews, Molecular Dynamics: with Deterministic and Stochastic Numerical Methods, (Springer, 2015).